Introduce --primary-rgb, --accent-rgb, --success-rgb and --warning-rgb and replace hardcoded rgba(...) usages in CSS with rgba(var(--*-rgb), alpha) to allow dynamic alpha blending from theme colors. Add a hexToRgb helper in setup.js and populate these RGB variables in applyThemeToSetupPage (handles 3- and 6-digit hex and validates input), so runtime theme changes can drive translucent shadows, backgrounds and highlights.
Rename and consolidate portable user-data to usr/user-data and update tooling and runtime to match. Updated appdir-example/run-nebula.sh to point at usr/user-data; make-appdir.sh and update-appdir.sh now patch/copy the launcher, create the usr/user-data directory and set secure permissions (mkdir -p, chmod 700), and remove sed backups. portable-data.js now defaults to app-local user-data and prefers <AppDir>/usr/user-data on Linux AppDir builds (with safe fs checks). Also minor UI change in renderer/setup.css to make the footer background transparent and disable the backdrop blur.
Enhanced zoom target selection to better support parent windows in desktop mode and improved menu popup zoom refresh. Updated setup.css to refine layout, scrolling, and visual effects, including better handling for small screen heights and improved sticky footer appearance.
Introduces a multi-step onboarding process for first-time users, including theme selection and default browser setup. Adds setup.html, setup.js, and setup.css for the new UI, updates main.js and preload.js to support onboarding logic and IPC handlers, and adjusts theme-manager.js for correct theme directory resolution.